Finding records in PhysioBank

The new PhysioNet website is available at: https://physionet.org. We welcome your feedback.

Among the most frequent questions asked by visitors to PhysioNet are requests for data with specific combinations of characteristics. For example, “Which records include three or more ECG signals and a respiration signal, are at least two hours long, and are from male patients between the ages of 60 and 70?” This and many similar questions are readily answered using the PhysioBank Index. (See how to do this below.)

The PhysioBank Index

All records in PhysioBank that can be viewed by the PhysioBank ATM are indexed in the PhysioBank Index, a 392M text file (last updated Wednesday, 17 April 2019).

You can search the PhysioBank Index using a variety of methods:

PhysioBank Record Search

This is the most powerful method, and the easiest (use it from within your web browser). Click the link above to begin, or try the hands-on tutorial introduction below.

The pbsearch software package

This package includes sources for the PhysioBank Record Search (the web client pbsearch, and the server pbsqsd) as well as a command-line client (pbsqc), a stand-alone search engine (pbsqs), and a set of plugins. The software runs on all popular platforms; it can work with a local copy of the Index, or it can read the Index directly from the PhysioNet web server or a mirror via HTTP. This package may be useful if you wish to customize or automate your searches; familiarize yourself with the web-based PhysioBank Record Search first.

Standard command-line tools such as grep, cut, and uniq

You can also search the Index using Unix (POSIX) utilities for manipulating text files, as described below. These are standard components of GNU/Linux, Mac OS X, and all other Unix and Unix-like platforms; Windows users can get them by installing Cygwin.

If you wish to index your own PhysioBank-compatible records, the portable sources for the PhysioBank Index generator are available in the pbindex software package.

Downloading the PhysioBank Index

You do not need to download the Index in order to use the recommended PhysioBank Record Search. If you wish to another method for searching the Index, you may need to do so.

The Index can be downloaded using any of these commands:

wfdbcat physiobank-index >temp; mv temp physiobank-index

or

curl http://physionet.org/physiobank/database/physiobank-index >physiobank-index

or

rsync -avz physionet.org::physiobank-core/database/physiobank-index .

Don't attempt to load the Index directly in your web browser, since its large size will cause problems for most browsers! (wfdbcat is part of the WFDB Software Package, curl is available here, and rsync is here. All three are open-source and run on all popular platforms.)

Contents and format of the Index

Each line of the PhysioBank Index describes one signal, annotation file, or other feature of a single PhysioBank record; there are about 860,000 lines in the Index. All lines pertaining to any given record are consecutive, and the records appear in dictionary order. Here is a sample from the Index:

edb/e0103	Info1	Mixed angina
edb/e0103	Info2	1-vessel disease (RCA)
edb/e0103	Meds1	nitrates, diltiazem
edb/e0103	Info3	Recorder type: ICR 7200
edb/e0103	AgeSex	62	M
edb/e0103	ECG1	V4	250	200 adu/mV	7200
edb/e0103	ECG2	MLIII	250	200 adu/mV	7200
edb/e0103	AnnR1	atr	250	7336	7200	0-7200
edb/e0103	AnnR1	atr/(N	250	9	5243
edb/e0103	AnnR1	atr/N	250	7212	7199	0-7200
edb/e0103	AnnR1	atr/s	250	15	6098	859-6956
edb/e0103	AnnR1	atr/(VT	250	2	6
edb/e0103	AnnR1	atr/V	250	82	5069	1892-6961
edb/e0103	AnnR1	atr/(B	250	6	58
edb/e0103	AnnR1	atr/F	250	2	574	2132-2706
edb/e0103	AnnR1	atr/~	250	8	3613	2682-6295

Each entry (line) of the Index contains up to seven tab-separated fields (columns) that describe a signal, annotation set, or feature associated with the record. For entries describing features (such as the first five lines in the example above), these columns are (from left to right):

Record name

In each entry in the example above, the record name is edb/e0103, i.e., record e0103 of the collection named edb. (The file DBS contains short descriptions of each collection; edb is the European ST-T Database.)

Class (feature type)

One of:

  • AgeSex: The next two columns contain the subject's age and gender. Age of subjects over 89 is PHI, and is stated as 90; unknown age is stated as -1. Ages of infants less than 1 year old may be shown as 0, or as a decimal fraction of a year (e.g., 0.3). Gender is stated as M or F, or ? if unknown. If neither age nor gender is known, this entry is omitted from the Index.
  • Diagn: The next column contains one or more free-text diagnoses. This entry appears only if diagnoses have been tagged in the .hea file for the record; in many cases, as in the example above, diagnoses appear as Info since they have not been tagged.
  • Infon: Untagged information collected from the .hea file for the record.
  • Medsn: One or more medications. As for Diag, this entry appears only if medications have been tagged in the .hea file; otherwise, they appear as Info.

A sequence number n is affixed to each entry for any given class if more than one such entry is possible in a single record (e.g., Info1, Info2, etc.); this is done even if only a single entry is actually present. The sequence numbers are consecutive but not necessarily contiguous, as the example above illustrates. Note that entries describing features are present only for a relatively small number of records.

Feature value(s)

A string providing the value for the feature named in the previous column. Feature values may include spaces but not tabs. (An AgeSex entry has two feature value fields, which are separated by a tab.)

In entries describing signal and annotation sets, the columns are (from left to right):

Record name

(as above)

Class

The category of data: either

  • a category of signals (defined in sigclasses)
  • a category of annotations (either AnnM for machine-derived annotations, or AnnR for reference annotations)

A sequence number n is affixed to each entry for any given class if more than one entry is possible in a single record (e.g., ECG1, ECG2, etc.); this is done even if only a single entry is actually present.

Signal or annotator name

The index contains an entry for each signal and for each annotation file. In addition, each type of annotation present in a given annotation file is counted separately and listed in its own annotation subset entry. The last eight lines in the example above are annotation subset entries, summarizing the (N, N, s, etc. annotations present in within the atr annotation file. See PhysioBank Annotations for a glossary of commonly used annotations.

Sampling frequency (Hz)

The number of samples per second. Annotations contain timestamps with a time resolution equal to the reciprocal of the sampling frequency.

Gain (of signals) or number (of annotations)

Gain is expressed as adu per physical unit. An adu is one analog-to-digital converter unit (the quantization step, which is the smallest measurable difference between samples). An amplitude resolution of 200 adu/mV, as for the ECG signals in the example above, means that two unscaled samples that differ by 20 units represent a potential difference of 0.1 millivolt.

Duration

Length of the signal or annotation set, in seconds.

Time intervals

Interval(s) during which samples or annotations have been recorded if present. The times shown for the beginning and end of each interval are the elapsed times in seconds from the beginning of the record.

Some records have both annotated and unannotated segments; in these cases, the length of the annotation set is shorter than the length of the signals. In annotation subset entries, the duration and time interval reflect the times of the first and last annotations of the associated type, and are generally shorter than the entire annotation set.

In most cases, signals are present throughout, and the last column is omitted in entries that describe such signals. The MIMIC II Waveform Database is an exception to this rule, since many of its signals have been recorded in only a subset of segments; in these cases, the lengths of the signals is less than that of the entire record, and there may be more than one time interval shown.

As for the signal and annotation set lines, the first two columns are the record name and class (data type). The first four feature lines shown above illustrate diagnoses, medications, and two lines of free-text information; the data appear in the third column. The final feature line contains the age (in years) in the third column, and the sex (M, F, or ? in the fourth column). If the subject’s age is over 89, it is shown as 90 (since ages over 89 are protected health information); if the age was not recorded, it is shown as –1.

Using PhysioBank Record Search to search the PhysioBank Index

In this section, we'll answer the question at the top of this page using PhysioBank Record Search. Please follow along in your web browser. Note that your results may vary from those shown below if additional records have been added and indexed since this tutorial was written.

PhysioBank Record Search is controlled from your browser. You can open it from the PhysioNet menu button at the top left corner of most pages on PhysioNet (choose PhysioBank → PhysioBank Search). To follow this exercise, click here to open it in another browser tab or window. You should then be able to go back and forth between this page and the PhysioBank Record Search page.

The upper section of the page, below the PhysioBank Record Search heading, contains a form for composing simple queries, searches that are defined by a Subject, a Relationship, and a Value. Once you have performed any simple queries, the Results section opens beneath the upper section; it contains the results of your queries and additional controls for combining and manipulating them. Near the bottom of the page, on-line help for PhysioBank Record Search appears below the heading How to search for records in PhysioBank. Read the on-line help to familiarize yourself with the controls.

If you have used PhysioBank Record Search within the past week or so on this computer, you will see two buttons in the upper section of the page, labeled “Restore previous session” and “Discard previous results”. Unless you wish to keep the results of your earlier searches, discard them before continuing.

To answer the example question (”Which records include three or more ECG signals and a respiration signal, are at least two hours long, and are from male patients between the ages of 60 and 70?”), our strategy will be to decompose it into simple queries, collect the results of those queries, and combine them. At each step, we'll be able to see how many PhysioBank records fit the simple queries.

Let’s begin. The first simple query will find all records that contain three or more ECG signals. From the Subject menu, select '(#) ECG'. The notation '(#)' indicates that we can specify a minimum number of signals of this type (ECG) in the Name/# box below the Subject menu; type 3 into that box. From the Relationship menu, choose '?' (”defined”), since for this simple query, we only want to know if the 3 ECGs exist. It is unnecessary to enter anything in the Value box (if you do, it will be ignored since the Relationship is '?'). Once the query has been set up, click on Get List.

Immediately below the Results heading, you should now see a line that looks like this:

  ☐ A [25372] ECG-3 ?

“A” is the tag for the list of results of this query; the bracketed number (which, as noted above, may vary) is the number of PhysioBank records that match the criterion that you have just defined, and the criterion itself appears as a link (”ECG-3 ?”). Click the link (on the search page; the facsimile shown above is not a working link) to view the results if you wish (a list of 25372 record names, probably beginning with challenge/2009/test-set-a/101a/101a).

For the second simple query, let's find all records that include a respiration signal. We might construct a query such as 'Resp ?', but since we also want records that are at least two hours long, we can include that constraint as an element of this query. Select '(#) Respiration' as the Subject, '>=' as the Relationship, and type '2:0:0' (i.e., two hours) as the Value. Don’t forget to erase the '3' that may be left in the Name/# box from the previous query; it’s unnecessary (but harmless) to type a '1' in its place.

After clicking Get List, a second checkbox and result appears. New results appear above old ones, so you should now see this:

  ☐ B [38507] Resp >= 2:0:0
  ☐ A [25372] ECG-3 ?

There are many records that satisfy this criterion, too.

If you forgot to erase the '3' before clicking 'Get list', list B will be much shorter, since it will contain only records that include 3 or more respiration signals. Such records do exist (for example, some have thoracic and abdominal impedance plethysmograms and a simultaneously recorded nasal thermistor signal), but they are relatively uncommon.

Next, let’s find records from male subjects ('sex = M'). By now, you may be becoming familiar with the steps of creating a simple query: select the subject, then the relationship, then type a value, and click Get List.

  ☐ C [9962] sex = M
  ☐ B [38507] Resp >= 2:0:0
  ☐ A [25372] ECG-3 ?

You may be surprised that list C has only 9662 records from male subjects, given that list B has about 4 times as many records. For many records, however, information about the subject’s gender (and, as we shall see, age) is not available.

To restrict the search to a range of ages (60-70), we'll use two simple queries ('age >= 60' and 'age <= 70'). When you have run these, your results should look like this:

  ☐ E [10938] age <= 70
  ☐ D [10022] age >= 60
  ☐ C [9962] sex = M
  ☐ B [38507] Resp >= 2:0:0
  ☐ A [25372] ECG-3 ?

The final step is to combine all of these results. The 'And' button combines two or more selected lists, producing a new list containing those records that belong to all of its input lists. Select each of the five lists now by clicking on its checkbox, then click 'And' to generate list F:

  ☐ F [131] E ∩ D ∩ C ∩ B ∩ A
  ☐ E [10938] age <= 70
  ☐ D [10022] age >= 60
  ☐ C [9962] sex = M
  ☐ B [38507] Resp >= 2:0:0
  ☐ A [25372] ECG-3 ?

The final list contains 131 records, all from the 'mimic2wdb/matched/' data collection (the MIMIC II Waveform Database Matched Subset). You can view or download the list of records if you wish by clicking on the link next to F, or you can examine the records using the PhysioBank ATM. If you wish to do this, select list F by clicking its checkbox, then click on 'Choose'. The PhysioBank ATM will appear in place of the PhysioBank Record Search page, and the first record belonging to list F will be preselected as input.

If you are unfamiliar with the ATM, read its on-line help (visible below the How to use the PhysioBank ATM heading), then click '*' (in the ATM control panel under Navigation) to dismiss the help and display the first 10 seconds of the first record. You can use any of the ATM's controls to examine the record as you wish; when you are ready, click on 'Next record' to view the next record in list F.

The '+' and '-' buttons in the ATM control panel are active only while you are examining search results. Use them to mark individual records of interest. When you click on either of them, a '+' or '-' appears after the record's name in the ATM's Record menu (control panel, upper left). Mark at least one record now.

After reviewing as many records as you wish, return to the search page (for example, by clicking the PhysioBank Record Search button in the ATM's page header). When you do, you will see that one or two new lists have been created below list F. These lists, tagged as F+ and F-, contain only those records that you have marked using the ATM's '+' and '-' buttons. You can select list F again and click 'Choose' to return to the ATM if you wish to mark additional records, and these lists will be updated as you do so. Although lists F+ and F- are described as “accepted from F” and “rejected from F”, you can use these lists in any way you wish. Note, however, that a list made by combining them with other lists will not update itself automatically if you make changes in them later on; to get updated results, repeat the actions you used to combine the lists initially.

If you don’t need to refer back to a list, select it and click on Erase to discard it. This helps to avoid confusion if you use PhysioBank Record Search frequently.

Your results are retained for about a week; after that, they will be removed. Download them if you wish to keep them (especially if you have invested effort in choosing individual records using the ATM). When you return, your previous results are identified using a browser cookie (pbs_id); if you use more than one browser, or more than one computer, you will have different cookies (hence different sets of results) for each one unless you synchronize your cookies.

Using standard command-line utilities to search the PhysioBank Index

Begin by downloading the Index using any of the methods above. Open a terminal emulator window and navigate to the directory in which you saved physiobank-index.

There are five records in PhysioBank that include a left ventricular stroke volume signal, which is labelled SV. Finding them is simple: type

grep SV physiobank-index

and the results appear in your terminal window quickly:

edb/e0112	AnnR1	atr/(SVTA	250	16	49
edb/e0114	AnnR1	atr/(SVTA	250	3	9
edb/e0607	AnnR1	atr/(SVTA	250	1	2
edb/e1304	AnnR1	atr/(SVTA	250	2	3
incartdb/I33	Info2	 PVCs, SVEBs,  supraventricular couplets
incartdb/I34	Info2	 SVEBs, couplets,  paroxysmal supraventricular tachycardia with aberrated QRS
incartdb/I70	Info2	 SVEBs with wide QRS, WPW
incartdb/I73	Info2	 PVCs on bradycardia, SVEBs, couplets
mghdb/mgh050	Info50	 34 min		VT vs. SVT with ABERRANCY
mghdb/mgh208	Info10	   Runs of VT/SVT
mitdb/114	AnnR1	atr/(SVTA	360	1	5
mitdb/201	AnnR1	atr/(SVTA	360	1	2
mitdb/207	Info7	 episode of SVTA.
mitdb/207	AnnR1	atr/(SVTA	360	1	51
mitdb/209	AnnR1	atr/(SVTA	360	10	102
mitdb/220	AnnR1	atr/(SVTA	360	8	14
mitdb/222	AnnR1	atr/(SVTA	360	4	8
mitdb/234	AnnR1	atr/(SVTA	360	1	26
qtdb/sel114	AnnR6	atr/(SVTA	250	1	5
slpdb/slp59	SV1	SV	250	7.93846 adu/ml	14400
slpdb/slp60	SV1	SV	250	7.90293 adu/ml	21300
slpdb/slp61	SV1	SV	250	958.995 adu/cc	22200
slpdb/slp66	SV1	SV	250	9.957 adu/ml	13200
slpdb/slp67x	SV1	SV	250	5.25615 adu/ml	4620
vfdb/426	AnnR1	atr/(SVTA	250	3	81
vfdb/607	AnnR1	atr/(SVTA	250	2	26
vfdb/611	AnnM1	qrs/(SVTA	250	16	49
vfdb/611	AnnR2	atr/(SVTA	250	1	0
vfdb/611	AnnR3	qrsc/(SVTA	250	16	49

Most of these results are records containing supraventricular tacharrhythmias (annotated as '(SVTA'), and others contain SV in comments. These are easily ignored, but it's also possible to improve the search using either

grep $'\tSV\t' physiobank-index

(if you are using the bash shell), or

grep -P '\tSV\t' physiobank-index

(if you are using GNU grep). Either of these commands interprets the sequence \t as a tab character in the search pattern, so that the results contain only lines from the index in which SV appears surrounded by tabs (i.e., in a column by itself):

slpdb/slp59	SV1	SV	250	7.93846 adu/ml	14400
slpdb/slp60	SV1	SV	250	7.90293 adu/ml	21300
slpdb/slp61	SV1	SV	250	958.995 adu/cc	22200
slpdb/slp66	SV1	SV	250	9.957 adu/ml	13200
slpdb/slp67x	SV1	SV	250	5.25615 adu/ml	4620

Getting (re)acquainted with the command line

If you've ever used any version of Unix, or even MS-DOS, the examples on this page may look familiar. If not, consult any introductory book or on-line tutorial about Unix or GNU/Linux. Here are a few places to start:

  • The necessary shell (command-line interpreter, such as bash, csh, ksh, or sh) and command-line tools (grep, cut, sort, etc.) are standard components of GNU/Linux, Mac OS X, and all other Unix and Unix-like platforms; Windows users can get them by installing Cygwin.
  • The PhysioNet FAQ includes basic information about standard input and output, I/O redirection, and pipes, powerful and easily-understood concepts that are useful whenever working on the command line.
  • On-line tutorials, such as Working with Data, provide more examples of the use of the tools shown here.
  • After nearly 30 years, Kernighan and Pike's The Unix Programming Environment remains the best introduction to this approach of tackling problems using tools that each do one job well, and work well together. Used copies are far less expensive than new.

If we want to find records that have at least 3 ECG signals, we can look for ECG3:

grep ECG3 physiobank-index

This results in a very long list of records that quickly scrolls off the screen. If we want to know how long the list is, we can use wc to count the lines:

grep ECG3 physiobank-index | wc -l

(The pipe symbol, '|', connects a pair of commands; it means ”take the standard output of the command on the left and feed it to the standard input of the command on the right”.) When this page was written, there were 25,372 recordings with at least 3 ECG signals in PhysioBank. We can save the entire list by redirecting the standard output into a file, like this:

grep ECG3 physiobank-index >ECG3-records

The '>' collects the standard output of the command, which would otherwise be shown in the terminal window, and saves it in a file (ECG3-records).

Suppose what we really want are the longest such recordings. Here's how to find the 3 longest cases:

grep ECG3 physiobank-index | cut -f 1,6 | sort -nr -k2 | head -3

(This command uses pipes to chain four commands together, each one reading the output of the previous one; cut selects the first and sixth fields — the record name and the duration — from each line output by grep; sort rearranges the lines in reverse numerical order of the second field output by cut; and head discards all but the first three lines output by sort.) The output lists 3 recordings, each containing over 400 hours of ECG3:

mimic2wdb/31/3101148/	2299827
mimic2wdb/37/3752730/	1845755
mimic2wdb/32/3212213/	1842540

There is a caveat, however: these recordings are all from the MIMIC II database, and the signals are not necessarily continuous; in fact, they may not even be simultaneously available. To find a set of long records with at least 3 continuous, simultaneous ECG signals, we can exclude the MIMIC databases and the similar Challenge 2009 database from the search:

grep ECG3 physiobank-index | \
 egrep -i -v "mimic|challenge/2009" | \
 cut -f 1,6 | sort -nr -k2 | head -3

(Here the \ characters indicate the command continues on the following line.) The results are:

ltstdb/s30691	85860
ltstdb/s30731	85845
ltstdb/s30801	85821

These examples illustrate the flexibility of using standard command-line tools to search within the PhysioBank Index. If these tools are already familiar, it’s easy to perform much more complex searches, including many that would be very difficult to perform using a relational database and SQL.

How many records are in the index?

As of January 2012, over 36,000 record sets from over 50 collections are included in the PhysioBank Index. Many record sets include two or more records, and some records belong to more than one collection, so the number of record names in the index is nearly 73,000.

The MIMIC Database and the MIMIC II Waveform Database consist of record sets (pairs of records acquired simultaneously from each subject: a waveform record of signals sampled at 125 or 500 Hz, and a numerics record of vital signs sampled once per second or once per minute).

Records (or excerpts of records) may belong to more than one data collection:

Single-collection indices

Each file listed below contains an index for a PhysioBank data collection (or part of one). These files are concatenated to form the PhysioBank Index.

Icon  Name                      Last modified      Size  Description
[DIR] Parent Directory - [TXT] culm 17-Jan-2019 07:31 0 Complex Upper-Limb Movements [   ] ob1db 25-Aug-2016 15:39 288 OB-1 Fetal ECG Database [sample record] [   ] ahadb 25-Aug-2016 15:39 438 AHA Database [sample excluded record] [   ] excluded 25-Aug-2016 15:39 1.0K Recordings excluded from nsrdb [   ] aami-ec13 25-Aug-2016 15:39 1.0K ANSI/AAMI EC13 Test Waveforms [   ] shhpsgdb 25-Aug-2016 15:39 1.0K Sleep Heart Health Study PSG Database [sample record] [TXT] emgdb 25-Aug-2016 15:39 1.1K Examples of Electromyograms [   ] gaitdb 25-Aug-2016 15:39 1.3K Gait in Aging and Disease Database [   ] fpcgdb 25-Aug-2016 15:39 1.5K Fetal PCG Database [   ] szdb 25-Aug-2016 15:39 2.4K Post-Ictal Heart Rate Oscillations in Partial Epilepsy [   ] simfpcgdb 25-Aug-2016 15:39 2.4K Fetal PCG Database [   ] adfecgdb 25-Aug-2016 15:39 2.6K Abdominal and Direct Fetal ECG Database [   ] ltdb 25-Aug-2016 15:39 2.7K MIT-BIH Long-Term ECG Database [   ] bpssrat 25-Aug-2016 15:39 2.7K Blood Pressure in Salt-Sensitive Dahl Rats [   ] prcp 25-Aug-2016 15:39 2.7K Physiologic Response to Changes in Posture [TXT] local.css 25-Aug-2016 15:39 3.1K [   ] challenge_2016_training-c 25-Aug-2016 15:39 3.2K Challenge 2016 Training Set C [   ] charisdb 10-Jan-2017 06:17 3.2K CHARIS database [TXT] pwave 01-Feb-2018 06:38 3.2K MIT-BIH Arrhythmia Database P-Wave Annotations [   ] picsdb 01-Feb-2017 06:20 3.3K Preterm Infant Cardio-Respiratory Signals Database [   ] sleep-edf 25-Aug-2016 15:39 3.6K Sleep-EDF Database, v1 [deprecated, use sleep-edfx] [   ] stdb 25-Aug-2016 15:39 5.0K MIT-BIH ST Change Database [   ] unicaprop 20-Oct-2018 07:31 5.1K UniCA ElectroTastegram Database (PROP) [   ] drivedb 25-Aug-2016 15:39 5.4K European ST-T Database [   ] challenge_2016_training-d 25-Aug-2016 15:39 5.6K Challenge 2016 Training Set D [   ] nstdb 25-Aug-2016 15:39 5.6K MIT-BIH Noise Stress Test Database [   ] gait-maturation-db_data 25-Aug-2016 15:39 5.8K Gait Maturation Database [   ] vfdb 25-Aug-2016 15:39 5.9K MIT-BIH Malignant Ventricular Ectopy Database [   ] osv 28-Sep-2017 06:42 6.0K Pattern Analysis of Oxygen Saturation Variability [   ] gaitndd 25-Aug-2016 15:39 6.3K Gait in Neurodegenerative Disease Database [   ] nsrdb 25-Aug-2016 15:39 6.5K MIT-BIH Normal Sinus Rhythm Database [   ] chfdb 25-Aug-2016 15:39 6.6K BIDMC Congestive Heart Failure Database [   ] challenge_2014_set-p2 25-Aug-2016 15:39 6.6K Challenge 2014 Extended Training Set [   ] macecgdb 25-Aug-2016 15:39 7.4K Motion Artifact Contaminated ECG Database [   ] cudb 25-Aug-2016 15:39 7.4K CU Ventricular Tachyarrhythmia Database [   ] mimic2cdb 25-Aug-2016 15:39 7.9K MIMIC II Clinical Database Public Subset [   ] nifeadb 20-Feb-2019 08:34 7.9K [   ] chf2db 25-Aug-2016 15:39 8.8K Congestive Heart Failure RR Interval Database [   ] rvmh1 15-Nov-2018 11:07 8.9K Response to Valsalva Maneuver in Humans [   ] afdb 25-Aug-2016 15:39 9.7K MIT-BIH Atrial Fibrillation Database [   ] slpdb 25-Aug-2016 15:39 10K MIT-BIH Polysomnographic Database [   ] videopulse 13-Jul-2017 08:41 10K Video Pulse Signals in Stationary and Motion Conditions [   ] challenge_2016_training-f 25-Aug-2016 15:39 12K Challenge 2016 Training Set F [   ] meditation_data 25-Aug-2016 15:39 13K Heart Rate Oscillations during Meditation [   ] cdb 25-Aug-2016 15:39 13K MIT-BIH ECG Compression Test Database [   ] fantasia 25-Aug-2016 15:39 14K Fantasia Database [   ] nsr2db 25-Aug-2016 15:39 14K Normal Sinus Rhythm RR Interval Database [   ] challenge_2013_set-a 25-Aug-2016 15:39 17K Challenge 2013 Training Set A [   ] sddb 25-Aug-2016 15:39 17K Sudden Cardiac Death Holter Database [   ] noneeg 14-Jul-2017 09:02 17K Non-EEG Dataset for Assessment of Neurological Status [   ] sufhsdb 14-Jul-2017 09:02 18K Shiraz University Fetal Heart Sounds Database [   ] sgamp 25-Aug-2016 15:39 18K Squid Giant Axon Membrane Potential [   ] cebsdb 25-Aug-2016 15:39 19K Combined measurement of ECG, Breathing and Seismocardiograms [   ] motion-artifact 25-Aug-2016 15:39 19K Motion Artifact Contaminated fNIRS and EEG Data [   ] challenge_2013_set-b 25-Aug-2016 15:39 22K Challenge 2013 Test Set B [   ] wrist 04-Oct-2017 06:26 22K Wrist PPG During Exercise [   ] ucddb 25-Aug-2016 15:39 22K UCD Sleep Apnea Database [   ] svdb 25-Aug-2016 15:39 23K MIT-BIH Supraventricular Arrhythmia Database [   ] iafdb 25-Aug-2016 15:39 23K Intracardiac Atrial Fibrillation Database [   ] aftdb 25-Aug-2016 15:39 24K AF Termination Challenge Database [   ] challenge_2011_sim 25-Aug-2016 15:39 24K Challenge 2011 Pilot Set [   ] ltafdb 25-Aug-2016 15:39 27K Long Term AF Database [TXT] mitdb 25-Aug-2016 15:39 28K MIT-BIH Arrhythmia Database [TXT] bidmc 20-Oct-2018 07:30 28K BIDMC PPG and Respiration Dataset [   ] voiced 20-Oct-2018 07:31 29K VOice ICar fEDerico II Database [   ] tpehgt 17-Aug-2018 07:10 30K Term-Preterm EHG DataSet with Tocogram (TPEHGT DS) [   ] sleepbrl 20-Oct-2018 07:30 31K Sleep Bioradiolocation Database [   ] taichidb 13-Jul-2017 08:41 32K Tai Chi, Physiological Complexity, and Healthy Aging - Gait [   ] nifecgdb 25-Aug-2016 15:39 33K Non-Invasive Fetal ECG Database [   ] apnea-ecg 25-Aug-2016 15:39 36K Apnea-ECG Database [   ] challenge_2010_set-a 25-Aug-2016 15:39 36K Challenge 2010 Training Set A [   ] challenge_2010_set-c 25-Aug-2016 15:39 38K Challenge 2010 Test Set C [   ] challenge_2010_set-b 25-Aug-2016 15:39 38K Challenge 2010 Test Set B [   ] ltrsvp 13-Jul-2017 08:37 43K EEG Signals from an RSVP Task [   ] shareedb 25-Aug-2016 15:39 44K European ST-T Database [   ] challenge_2014_set-p 25-Aug-2016 15:39 45K Challenge 2014 Training Set [   ] challenge_2016_training-b 25-Aug-2016 15:39 49K Challenge 2016 Training Set B [   ] edb 25-Aug-2016 15:39 50K European ST-T Database [   ] twadb 25-Aug-2016 15:39 53K T-Wave Alternans Challenge Database [   ] mvtdb_data 25-Aug-2016 15:39 55K Spontaneous Ventricular Tachyarrhythmia Database [   ] ltmm 17-Apr-2019 08:05 56K [   ] incartdb 25-Aug-2016 15:39 60K St Petersburg INCART 12-lead Arrhythmia Database [   ] mimicdb 25-Aug-2016 15:39 64K MIMIC Database [   ] challenge_2016_training-a 25-Aug-2016 15:39 66K Challenge 2016 Training Set A [   ] afpdb 25-Aug-2016 15:39 72K PAF Prediction Challenge Database [   ] challenge_2009_test-set-a 25-Aug-2016 15:39 79K Challenge 2009 Test Set A [   ] eegmat 13-Dec-2018 11:14 94K EEG During Mental Arithmetic Tasks [   ] mimicdb_numerics 25-Aug-2016 15:39 97K MIMIC Database Numerics [   ] sleep-edfx 18-Jul-2018 06:37 105K Sleep-EDF Database [Expanded] [   ] ecgiddb 25-Aug-2016 15:39 106K ECG-ID Database [   ] kfddb 25-Aug-2016 15:39 111K [   ] capslpdb 25-Aug-2016 15:39 122K CAP Sleep Database [   ] earh 28-Sep-2017 06:42 124K Evoked Auditory Responses in Heading Impaired [   ] qtdb 25-Aug-2016 15:39 178K QT Database [   ] mmgdb 25-Aug-2016 15:39 199K MMG Database [   ] challenge_2016_training-e 25-Aug-2016 15:39 222K Challenge 2016 Training Set E [   ] challenge_2015_training 25-Aug-2016 15:39 235K Challenge 2015 Training Set [TXT] ehgdb 25-Aug-2016 15:39 247K Icelandic 16-electrode Electrohysterogram Database [   ] staffiii 13-Jul-2017 08:40 253K STAFF III Database [TXT] ltstdb 25-Aug-2016 15:39 272K Long Term ST Database [   ] tpehgdb 25-Aug-2016 15:39 317K Icelandic 16-electrode Electrohysterogram Database [   ] challenge_2009_test-set-b 25-Aug-2016 15:39 340K Challenge 2009 Test Set B [   ] challenge_2011_set-b 25-Aug-2016 15:39 345K Challenge 2011 Test Set B [   ] mghdb 25-Aug-2016 15:39 513K MGH/MF Waveform Database [   ] challenge_2017_training 05-Mar-2017 07:01 533K Challenge 2017 Training Set [   ] challenge_2011_set-a 25-Aug-2016 15:39 690K Challenge 2011 Training Set A [   ] earndb 25-Aug-2016 15:39 702K Evoked Auditory Responses in Normals [   ] challenge_2018_test 21-Feb-2018 06:58 805K Challenge 2018 Test Set [   ] challenge_2018_training 21-Feb-2018 06:50 860K Challenge 2018 Training Set [   ] crisdb 25-Aug-2016 15:39 923K CAST RR Interval Sub-Study Database [   ] erpbci 25-Aug-2016 15:39 943K ERP-based Brain-Computer Interface recordings [   ] ctu-uhb-ctgdb 25-Aug-2016 15:39 1.0M CTU-CHB Intrapartum Cardiotocography Database [   ] chbmit 25-Aug-2016 15:39 1.1M CHB-MIT Scalp EEG Database [   ] hbedb 25-Aug-2016 15:39 1.2M European ST-T Database [   ] cves 05-Oct-2018 07:59 1.6M Cerebral Vasoregulation in Elderly with Stroke [   ] mssvepdb 02-Sep-2016 06:07 1.7M MAMEM SSVEP Database [   ] ptbdb 25-Aug-2016 15:39 2.1M PTB Diagnostic ECG Database [   ] mimic2db_numerics 25-Aug-2016 15:39 3.5M MIMIC II Waveform DB, v2 Numerics [deprecated, use v3] [   ] mimic2db 25-Aug-2016 15:39 4.8M MIMIC II Waveform DB, v2 [deprecated, use v3] [   ] eegmmidb 25-Aug-2016 15:39 5.2M EEG Motor Movement/Imagery Dataset [   ] mimic2wdb_matched 07-Aug-2017 19:23 8.5M MIMIC II Waveform Database Matched Subset [   ] ecgdmmld 25-Aug-2016 15:39 11M ECG Effects of Dofetilide, Moxifloxacin, Dofetilide+Mexiletine, Dofetilide+Lidocaine and Moxifloxacin+Diltiazem [   ] ecgrdvq 25-Aug-2016 15:39 14M ECG Effects of Ranolazine, Dofetilide, Verapamil, and Quinidine [   ] mimic2wdb_37 27-Mar-2018 23:01 19M MIMIC II/III Waveform Database, part 7 [   ] ecgcipa 13-Dec-2018 11:14 19M CiPA ECG Validation Study [   ] mimic2wdb_32 27-Mar-2018 23:01 19M MIMIC II/III Waveform Database, part 2 [   ] mimic2wdb_34 27-Mar-2018 23:01 19M MIMIC II/III Waveform Database, part 4 [   ] mimic2wdb_36 27-Mar-2018 23:01 19M MIMIC II/III Waveform Database, part 6 [   ] mimic2wdb_35 27-Mar-2018 23:01 19M MIMIC II/III Waveform Database, part 5 [   ] mimic2wdb_38 27-Mar-2018 23:01 19M MIMIC II/III Waveform Database, part 8 [   ] mimic2wdb_30 27-Mar-2018 23:01 19M MIMIC II/III Waveform Database, part 0 [   ] mimic2wdb_39 27-Mar-2018 23:01 19M MIMIC II/III Waveform Database, part 9 [   ] mimic2wdb_33 27-Mar-2018 23:01 19M MIMIC II/III Waveform Database, part 3 [   ] mimic2wdb_31 27-Mar-2018 23:01 19M MIMIC II/III Waveform Database, part 1 [   ] fecgsyndb 25-Aug-2016 15:39 32M Fetal ECG Synthetic Database [   ] mimic3wdb_matched 17-Mar-2018 20:19 84M MIMIC III Waveform Database Matched Subset

Questions and Comments

If you would like help understanding, using, or downloading content, please see our Frequently Asked Questions.

If you have any comments, feedback, or particular questions regarding this page, please send them to the webmaster.

Comments and issues can also be raised on PhysioNet's GitHub page.

Updated Friday, 28-Oct-2016 22:58:42 CEST

PhysioNet is supported by the National Institute of General Medical Sciences (NIGMS) and the National Institute of Biomedical Imaging and Bioengineering (NIBIB) under NIH grant number 2R01GM104987-09.